Python
pyOpenMS
Python bindings to OpenMS-lib. Write custom analysis scripts and integrate OpenMS into Python workflows.
Key features
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Run OpenMS-lib algorithms directly in Python
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Pandas DataFrame export for common OpenMS-lib datastructures
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Run in scripts or in Jupyter Notebooks
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Seamless integration with the scientific Python stack
Getting Started
Getting Started
Developers
Contribute
Any class in OpenMS-lib can be easily wrapped and used with PyOpenMS.